October 29, 2015
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CSS sets predict risk category, RFS in colorectal cancer

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Combinatory cancer hallmark-based gene signature sets more effectively predicted risk category and RFS than other prognostic predictors for patients with stage II colorectal cancer, according to results of a meta-analysis.

Perspective from David H. Ilson, MD, PhD

Edwin Wang, PhD, of the department of medicine at McGill University in Montreal, and colleagues sought to develop combinatory cancer hallmark-based gene signature sets (CSS) to better predict prognosis among patients with stage II colorectal cancer. They also hoped to identify patients who might derive benefit from fluorouracil-based adjuvant chemotherapy.

The researchers analyzed 13 retrospective studies of patients with stage II colorectal cancer who received clinical follow-up and underwent adjuvant chemotherapy.

The studies included a combined 1,005 patients. Of these, 162 patients from two studies were used as a discovery cohort, and 843 patients from 11 studies were used as a validation cohort.

In the discovery cohort, Wang and colleagues identified eight cancer hallmark-based gene signatures — comprised of 30 genes each — that were used to construct CSS sets that could predict prognosis.

The investigators validated the CSS sets in 767 patients from the validation cohort who had not undergone fluorouracil-based adjuvant chemotherapy.

The CSS sets classified 60% of patients as low risk, 28% as intermediate risk and 12% as high risk.

Five-year PFS rates were 94% in the low-risk group, 78% in the intermediate-risk group and 45% in the high-risk group (range, P = .02 to P < .001).

Researchers calculated a 94% accuracy rate for predicting low-risk patients and a 55% accuracy for predicting high-risk patients.

In addition, patients who the CSS set classified as having high-risk stage II colorectal cancer derived significant survival benefits from fluorouracil-based adjuvant chemotherapy, demonstrating a 30% to 40% reduced risk for relapse at 5 years (P = .004). However, low-risk patients treated with fluorouracil-based adjuvant chemotherapy demonstrated significantly shorter survival than nontreated patients (P = .04).

The approaches used in this study potentially could be used to investigate treatments for other types of malignancies, Greg Yothers, PhD, of University of Pittsburgh, and colleagues wrote.

“The novel approach of using combinations of gene ontology term-associated signatures has great promise for use in other cancer disease sites and potentially for other diseases with genetic association,” Yothers and colleagues wrote. “This scientific contribution is important even if the present stage II colon cancer results are never widely adopted in the clinic.” – by Jennifer Byrne

 

Disclosure: The researchers report no relevant disclosures.